STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000002619Uncharacterized protein. (140 aa)    
Predicted Functional Partners:
utp3
Something about silencing protein 10-like protein.
   
   0.950
bysl
Uncharacterized protein.
   
 
 0.945
rbm19
Putative RNA-binding protein 19.
   
 
 0.920
aatf
Uncharacterized protein.
   
 
 0.907
nop58
Nop domain-containing protein.
   
   0.905
pum3
PUM-HD domain-containing protein.
   
  
 0.875
cebpz
CBF domain-containing protein.
   
 
 0.868
ddx18
RNA helicase.
   
 
 0.864
rsl1d1
Uncharacterized protein.
   
  
 0.859
nol6
Nucleolar protein 6.
   
 
 0.848
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.