Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
acbd5Acyl-CoA-binding domain-containing protein 5; Binds medium- and long-chain acyl-CoA esters. (500 aa)    
Predicted Functional Partners:
zfpl1
Uncharacterized protein.
    
 
 0.882
nfs1
Aminotran_5 domain-containing protein.
   
  
 0.869
K4G507_CALMI
Glutaredoxin 5.
      
 0.857
pald1
Uncharacterized protein.
      
 0.856
prkrip1
Uncharacterized protein.
      
 0.850
agps
Alkylglycerone-phosphate synthase; Catalyzes the exchange of an acyl for a long-chain alkyl group and the formation of the ether bond in the biosynthesis of ether phospholipids; Belongs to the FAD-binding oxidoreductase/transferase type 4 family.
    
 
 0.833
gdap1
Ganglioside-induced differentiation-associated protein 1-like protein; Belongs to the GST superfamily.
     
 0.803
atad1
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 
 0.783
pex13
SH3 domain-containing protein.
   
 0.778
pex14
Pex14_N domain-containing protein.
   
 0.770
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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