STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfap20DUF667 domain-containing protein. (212 aa)    
Predicted Functional Partners:
tbc1d32
Uncharacterized protein.
    
 
 0.766
efhc2
Uncharacterized protein.
    
 
 0.763
arl2bp
ARL2_Bind_BART domain-containing protein.
    
 
 0.755
cfap52
WD repeat domain 16.
    
 
 0.693
tekt2
Uncharacterized protein.
   
   0.691
ENSCMIP00000000125
Uncharacterized protein.
    
   0.688
mns1
Uncharacterized protein.
    
   0.688
LOC103184705
Uncharacterized protein.
    
   0.688
LOC103179150
Uncharacterized protein.
    
   0.688
LOC103187187
Uncharacterized protein.
    
   0.688
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.