tenm2 protein (Callorhinchus milii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

tenm2

Uncharacterized protein. (2780 aa)

Predicted Functional Partners:

insc

0.743

gcgr

0.629

adgrl2

0.609

adgrl1

0.609

ankrd6

0.604

adgrl3

0.603

gcg

0.581

sh3pxd2b

0.577

th

0.572

apbb3

0.566

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
adgrl1	adgrl2	ENSCMIP00000046997	ENSCMIP00000020159	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.429
adgrl1	adgrl3	ENSCMIP00000046997	ENSCMIP00000037572	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.429
adgrl1	tenm2	ENSCMIP00000046997	ENSCMIP00000002689	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein.	0.609
adgrl2	adgrl1	ENSCMIP00000020159	ENSCMIP00000046997	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.429
adgrl2	adgrl3	ENSCMIP00000020159	ENSCMIP00000037572	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.429
adgrl2	tenm2	ENSCMIP00000020159	ENSCMIP00000002689	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein.	0.609
adgrl3	adgrl1	ENSCMIP00000037572	ENSCMIP00000046997	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.429
adgrl3	adgrl2	ENSCMIP00000037572	ENSCMIP00000020159	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.429
adgrl3	tenm2	ENSCMIP00000037572	ENSCMIP00000002689	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein.	0.603
ankrd6	apbb3	ENSCMIP00000041659	ENSCMIP00000040683	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.743
ankrd6	insc	ENSCMIP00000041659	ENSCMIP00000033897	ANK_REP_REGION domain-containing protein.	INSC_LBD domain-containing protein.	0.622
ankrd6	sh3pxd2b	ENSCMIP00000041659	ENSCMIP00000006518	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.661
ankrd6	tenm2	ENSCMIP00000041659	ENSCMIP00000002689	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.604
apbb3	ankrd6	ENSCMIP00000040683	ENSCMIP00000041659	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.743
apbb3	insc	ENSCMIP00000040683	ENSCMIP00000033897	Uncharacterized protein.	INSC_LBD domain-containing protein.	0.588
apbb3	sh3pxd2b	ENSCMIP00000040683	ENSCMIP00000006518	Uncharacterized protein.	Uncharacterized protein.	0.610
apbb3	tenm2	ENSCMIP00000040683	ENSCMIP00000002689	Uncharacterized protein.	Uncharacterized protein.	0.566
gcg	gcgr	ENSCMIP00000014233	ENSCMIP00000048740	Glucagon; Glucagon plays a key role in glucose metabolism and homeostasis. Regulates blood glucose by increasing gluconeogenesis and decreasing glycolysis.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.988
gcg	insc	ENSCMIP00000014233	ENSCMIP00000033897	Glucagon; Glucagon plays a key role in glucose metabolism and homeostasis. Regulates blood glucose by increasing gluconeogenesis and decreasing glycolysis.	INSC_LBD domain-containing protein.	0.623
gcg	tenm2	ENSCMIP00000014233	ENSCMIP00000002689	Glucagon; Glucagon plays a key role in glucose metabolism and homeostasis. Regulates blood glucose by increasing gluconeogenesis and decreasing glycolysis.	Uncharacterized protein.	0.581