STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000002703Uncharacterized protein. (262 aa)    
Predicted Functional Partners:
ash2l
B30.2/SPRY domain-containing protein.
   
 
 0.933
rbbp5
WD_REPEATS_REGION domain-containing protein.
    
 
 0.928
dpy30
Uncharacterized protein.
    
 
 0.924
wdr82
WD repeat-containing protein 82.
   
 
 0.912
actl6a
Actin-like 6A; Belongs to the actin family.
   
 
 0.674
smarcb1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
    
 
 0.670
ENSCMIP00000012968
Uncharacterized protein.
   
 
 0.652
Setd1b
N-SET domain-containing protein.
   
 
 0.652
ENSCMIP00000012983
Uncharacterized protein.
   
 
 0.652
ENSCMIP00000012989
RRM domain-containing protein.
   
 
 0.652
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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