Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103173530Chorein_N domain-containing protein. (279 aa)    
Predicted Functional Partners:
LOC103190656
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
 
 0.791
wipi2
Uncharacterized protein.
    
 
 0.657
wipi1
Uncharacterized protein.
    
 
 0.657
ENSCMIP00000035149
Protein kinase domain-containing protein.
   
 
 0.626
ulk1
DUF3543 domain-containing protein.
   
 
 0.626
ulk2
Unc-51-like kinase 2.
   
 
 0.626
ENSCMIP00000003629
Uncharacterized protein.
    
 
 0.572
wdr45b
Uncharacterized protein.
    
 
 0.572
ulk3
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.506
Stk35
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.506
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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