STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103174351Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (128 aa)    
Predicted Functional Partners:
arl2bp
ARL2_Bind_BART domain-containing protein.
   
 0.983
pde6d
GMP_PDE_delta domain-containing protein.
    
 0.971
tbcd
TFCD_C domain-containing protein.
    
 0.967
unc119
GMP_PDE_delta domain-containing protein.
    
 
 0.958
unc119b
GMP_PDE_delta domain-containing protein.
    
 
 0.725
tbce
CAP-Gly domain-containing protein.
    
 
 0.675
eif3g
Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA.
 
 
    0.654
tbcb
Tubulin-folding cofactor B-like protein.
   
  
 0.629
tbcc
C-CAP/cofactor C-like domain-containing protein.
    
 
 0.614
tbca
Tubulin-specific chaperone A; Belongs to the TBCA family.
    
 
 0.591
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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