Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000002807Uncharacterized protein. (1002 aa)    
Predicted Functional Partners:
nrip2
Asp_protease domain-containing protein.
      
 0.596
LOC103178823
Uncharacterized protein.
      
 0.554
dnal4
Dynein light chain.
    
 
 0.503
map3k14
Protein kinase domain-containing protein.
      
 0.499
fam168a
Uncharacterized protein.
   
  
 0.494
hnrnpk
Uncharacterized protein.
      
 0.484
vps26a
Vacuolar protein sorting-associated protein 26A-like protein.
      
 0.483
dag1
Peptidase S72 domain-containing protein.
      
 0.483
slc4a11
Uncharacterized protein.
      
 0.476
arpc2
Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
      
 0.476
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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