Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103174360STAT_bind domain-containing protein. (79 aa)    
Predicted Functional Partners:
ep300
Uncharacterized protein.
    
 0.838
crebbp
Uncharacterized protein.
    
 0.806
il4r
Fibronectin type-III domain-containing protein.
   
 0.783
LOC103191066
Signal transducer and activator of transcription.
  
 0.702
tbk1
Serine/threonine-protein kinase TBK1-like protein.
   
 0.670
ikbke
Protein kinase domain-containing protein.
   
 0.670
ptpn1
Tyrosine-protein phosphatase non-receptor type.
   
 0.670
ptpn2
Tyrosine-protein phosphatase non-receptor type.
   
 0.670
irf1
Interferon regulatory factor.
   
 0.668
pdgfrb
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
    
 0.666
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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