Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103174362Uncharacterized protein. (47 aa)    
Predicted Functional Partners:
ap2m1
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
     
 0.564
LOC103175408
Uncharacterized protein.
      
 0.501
dnaaf4
Dyslexia susceptibility 1 candidate 1.
      
 0.483
ubqln1
Uncharacterized protein.
    
  0.469
LOC103189527
AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]
    
  0.468
ap2s1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
  0.460
fam91a1
Uncharacterized protein.
      
 0.445
acot13
Thioesterase superfamily member 2.
      
 0.445
vamp3
V-SNARE coiled-coil homology domain-containing protein.
     
  0.441
LOC103175161
V-SNARE coiled-coil homology domain-containing protein.
     
  0.439
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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