Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000002865Uncharacterized protein. (186 aa)    
Predicted Functional Partners:
LOC103190656
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
 
 0.858
wipi2
Uncharacterized protein.
    
 
 0.728
wipi1
Uncharacterized protein.
    
 
 0.728
ENSCMIP00000003629
Uncharacterized protein.
    
 
 0.713
wdr45b
Uncharacterized protein.
    
 
 0.713
ENSCMIP00000035149
Protein kinase domain-containing protein.
   
 
 0.677
ulk1
DUF3543 domain-containing protein.
   
 
 0.677
ulk2
Unc-51-like kinase 2.
   
 
 0.677
atg13
Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.
   
  
 0.601
pik3r4
Uncharacterized protein.
   
  
 0.588
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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