STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc27a4Uncharacterized protein. (650 aa)    
Predicted Functional Partners:
slc27a6
AMP-binding domain-containing protein.
  
  
 
0.907
slc27a2
Uncharacterized protein.
  
  
 
0.907
bbs7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
   
 0.854
Bbs1
BBS1 domain-containing protein.
   
 0.852
bbs9
Uncharacterized protein.
   
 0.849
bbs4
Bardet-Biedl syndrome 4 protein.
   
 0.834
ttc8
TPR_REGION domain-containing protein.
   
 0.817
scp2
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.687
lztfl1
Leucine zipper transcription factor-like protein 1.
   
 0.678
ENSCMIP00000029411
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.658
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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