Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC103174384Carn_acyltransf domain-containing protein. (183 aa)    
Predicted Functional Partners:
vdac1
Uncharacterized protein.
   
 
 0.649
ENSCMIP00000036724
Uncharacterized protein.
      
 0.491
aasdh
Carrier domain-containing protein.
      
 0.481
LOC103176643
Uncharacterized protein; Belongs to the semaphorin family.
      
 0.480
gpat3
PlsC domain-containing protein.
      
 0.463
gpat4
PlsC domain-containing protein.
      
 0.463
acaa2
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
      
 0.460
ep300
Uncharacterized protein.
    
  0.452
eci2
ACB domain-containing protein.
   
  
 0.447
acox3
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
      
 0.437
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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