Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
serpinc1SERPIN domain-containing protein; Belongs to the serpin family. (636 aa)    
Predicted Functional Partners:
f2
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.999
fgb
Fibrinogen beta chain.
   
 0.959
apoh
Uncharacterized protein.
   
 0.946
fgg
Fibrinogen gamma polypeptide.
   
 0.909
LOC103189384
Fib_alpha domain-containing protein.
   
 
 0.909
ENSCMIP00000025796
Fibrinogen C-terminal domain-containing protein.
   
 
 0.909
proc
Uncharacterized protein.
   
 0.893
serpind1
SERPIN domain-containing protein; Belongs to the serpin family.
  
 
0.865
LOC103183099
Alpha-1-microglobulin.
   
 
 0.848
serpinf1
SERPIN domain-containing protein; Belongs to the serpin family.
  
 0.789
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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