LOC103171956 protein (Callorhinchus milii) - STRING interaction network

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Score

LOC103171956

RRM domain-containing protein. (289 aa)

Predicted Functional Partners:

upf1

0.822

ncbp2

0.810

ncbp1

0.793

LOC103173311

0.788

eif4a2

0.788

pan3

0.760

eif4a3

0.731

ddx6

0.726

atxn2

0.722

ENSCMIP00000001790

0.720

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000001790	LOC103171956	ENSCMIP00000001790	ENSCMIP00000003032	MIF4G domain-containing protein.	RRM domain-containing protein.	0.720
ENSCMIP00000001790	LOC103173311	ENSCMIP00000001790	ENSCMIP00000004803	MIF4G domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.785
ENSCMIP00000001790	atxn2	ENSCMIP00000001790	ENSCMIP00000014583	MIF4G domain-containing protein.	LsmAD domain-containing protein.	0.433
ENSCMIP00000001790	ddx6	ENSCMIP00000001790	ENSCMIP00000028373	MIF4G domain-containing protein.	Putative ATP-dependent RNA helicase DDX6-like protein; Belongs to the DEAD box helicase family.	0.470
ENSCMIP00000001790	eif4a2	ENSCMIP00000001790	ENSCMIP00000018603	MIF4G domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.785
ENSCMIP00000001790	eif4a3	ENSCMIP00000001790	ENSCMIP00000011072	MIF4G domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.853
ENSCMIP00000001790	ncbp1	ENSCMIP00000001790	ENSCMIP00000016241	MIF4G domain-containing protein.	MIF4G domain-containing protein.	0.834
ENSCMIP00000001790	ncbp2	ENSCMIP00000001790	ENSCMIP00000019578	MIF4G domain-containing protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.806
ENSCMIP00000001790	pan3	ENSCMIP00000001790	ENSCMIP00000019609	MIF4G domain-containing protein.	PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...]	0.433
ENSCMIP00000001790	upf1	ENSCMIP00000001790	ENSCMIP00000012225	MIF4G domain-containing protein.	Uncharacterized protein.	0.722
LOC103171956	ENSCMIP00000001790	ENSCMIP00000003032	ENSCMIP00000001790	RRM domain-containing protein.	MIF4G domain-containing protein.	0.720
LOC103171956	LOC103173311	ENSCMIP00000003032	ENSCMIP00000004803	RRM domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.788
LOC103171956	atxn2	ENSCMIP00000003032	ENSCMIP00000014583	RRM domain-containing protein.	LsmAD domain-containing protein.	0.722
LOC103171956	ddx6	ENSCMIP00000003032	ENSCMIP00000028373	RRM domain-containing protein.	Putative ATP-dependent RNA helicase DDX6-like protein; Belongs to the DEAD box helicase family.	0.726
LOC103171956	eif4a2	ENSCMIP00000003032	ENSCMIP00000018603	RRM domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.788
LOC103171956	eif4a3	ENSCMIP00000003032	ENSCMIP00000011072	RRM domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.731
LOC103171956	ncbp1	ENSCMIP00000003032	ENSCMIP00000016241	RRM domain-containing protein.	MIF4G domain-containing protein.	0.793
LOC103171956	ncbp2	ENSCMIP00000003032	ENSCMIP00000019578	RRM domain-containing protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.810
LOC103171956	pan3	ENSCMIP00000003032	ENSCMIP00000019609	RRM domain-containing protein.	PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...]	0.760
LOC103171956	upf1	ENSCMIP00000003032	ENSCMIP00000012225	RRM domain-containing protein.	Uncharacterized protein.	0.822