STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000003050DUF1518 domain-containing protein. (532 aa)    
Predicted Functional Partners:
Ncoa2
Uncharacterized protein.
 
     0.944
ncoa3
Nuclear receptor coactivator.
  
 
  
0.925
ENSCMIP00000003072
Uncharacterized protein.
 
      0.900
ar
Uncharacterized protein.
    
 0.804
crebbp
Uncharacterized protein.
   
 0.800
rxra
Uncharacterized protein.
   
 0.778
LOC103184778
Uncharacterized protein.
   
 0.778
ENSCMIP00000008571
BHLH domain-containing protein.
    
 0.774
vdr
Uncharacterized protein.
    
 0.761
nr1d2
Uncharacterized protein.
   
 0.753
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.