ggct protein (Callorhinchus milii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ggct

Uncharacterized protein. (226 aa)

Predicted Functional Partners:

LOC103179940

0.923

ggt7

0.922

LOC103173721

0.920

LOC103183976

0.920

LOC103179505

0.920

chac2

0.914

gclc

0.904

gss

0.903

lap3

0.900

LOC103187773

0.900

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103173721	LOC103179505	ENSCMIP00000004048	ENSCMIP00000041672	Uncharacterized protein.	Uncharacterized protein.	0.659
LOC103173721	LOC103179940	ENSCMIP00000004048	ENSCMIP00000037136	Uncharacterized protein.	Uncharacterized protein.	0.848
LOC103173721	LOC103183976	ENSCMIP00000004048	ENSCMIP00000030304	Uncharacterized protein.	Uncharacterized protein.	0.653
LOC103173721	LOC103187773	ENSCMIP00000004048	ENSCMIP00000021684	Uncharacterized protein.	Transcobalamin 2.	0.915
LOC103173721	chac2	ENSCMIP00000004048	ENSCMIP00000007838	Uncharacterized protein.	Gamma-glutamylcyclotransferase; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.	0.909
LOC103173721	gclc	ENSCMIP00000004048	ENSCMIP00000039652	Uncharacterized protein.	Uncharacterized protein.	0.920
LOC103173721	ggct	ENSCMIP00000004048	ENSCMIP00000003057	Uncharacterized protein.	Uncharacterized protein.	0.920
LOC103173721	ggt7	ENSCMIP00000004048	ENSCMIP00000038400	Uncharacterized protein.	Uncharacterized protein.	0.830
LOC103173721	gss	ENSCMIP00000004048	ENSCMIP00000005210	Uncharacterized protein.	Glutathione synthetase.	0.951
LOC103173721	lap3	ENSCMIP00000004048	ENSCMIP00000020053	Uncharacterized protein.	CYTOSOL_AP domain-containing protein.	0.915
LOC103179505	LOC103173721	ENSCMIP00000041672	ENSCMIP00000004048	Uncharacterized protein.	Uncharacterized protein.	0.659
LOC103179505	LOC103179940	ENSCMIP00000041672	ENSCMIP00000037136	Uncharacterized protein.	Uncharacterized protein.	0.848
LOC103179505	LOC103183976	ENSCMIP00000041672	ENSCMIP00000030304	Uncharacterized protein.	Uncharacterized protein.	0.660
LOC103179505	LOC103187773	ENSCMIP00000041672	ENSCMIP00000021684	Uncharacterized protein.	Transcobalamin 2.	0.915
LOC103179505	chac2	ENSCMIP00000041672	ENSCMIP00000007838	Uncharacterized protein.	Gamma-glutamylcyclotransferase; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.	0.909
LOC103179505	gclc	ENSCMIP00000041672	ENSCMIP00000039652	Uncharacterized protein.	Uncharacterized protein.	0.920
LOC103179505	ggct	ENSCMIP00000041672	ENSCMIP00000003057	Uncharacterized protein.	Uncharacterized protein.	0.920
LOC103179505	ggt7	ENSCMIP00000041672	ENSCMIP00000038400	Uncharacterized protein.	Uncharacterized protein.	0.826
LOC103179505	gss	ENSCMIP00000041672	ENSCMIP00000005210	Uncharacterized protein.	Glutathione synthetase.	0.951
LOC103179505	lap3	ENSCMIP00000041672	ENSCMIP00000020053	Uncharacterized protein.	CYTOSOL_AP domain-containing protein.	0.915