STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trappc6bUncharacterized protein. (181 aa)    
Predicted Functional Partners:
trappc2l
Uncharacterized protein.
   
 0.979
trappc4
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.973
trappc2
Uncharacterized protein.
   
 0.972
trappc3
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
   
 0.972
trappc8
Uncharacterized protein.
   
 0.971
trappc9
Uncharacterized protein.
   
 0.966
trappc10
Uncharacterized protein.
    
 0.966
trappc11
Uncharacterized protein.
   
 0.953
rab1a
Uncharacterized protein.
    
 0.924
trappc12
TPR_REGION domain-containing protein.
    
 0.880
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.