STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103172927Uncharacterized protein. (164 aa)    
Predicted Functional Partners:
ENSCMIP00000035523
annotation not available
  
     0.533
ENSCMIP00000000512
annotation not available
  
     0.531
ENSCMIP00000022575
C1q domain-containing protein.
  
     0.530
ENSCMIP00000046642
Uncharacterized protein.
  
     0.530
ENSCMIP00000018668
annotation not available
  
     0.529
ENSCMIP00000045680
Uncharacterized protein.
  
     0.528
ENSCMIP00000007502
Uncharacterized protein.
  
     0.527
ENSCMIP00000018714
Uncharacterized protein.
  
     0.524
col9a3
Uncharacterized protein.
  
     0.521
ENSCMIP00000015727
Uncharacterized protein.
  
     0.519
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.