STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103172929Uncharacterized protein. (173 aa)    
Predicted Functional Partners:
fau
Ubiquitin-like domain-containing protein.
   
 0.999
rpl35
Uncharacterized protein.
  
 0.995
rpl3
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
  
 0.995
rpl26l1
Ribosomal protein L26 isoform 1.
  
 0.995
Rpl19
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
  
 0.995
rpl23a
60S ribosomal protein L23a-like protein; Belongs to the universal ribosomal protein uL23 family.
  
 0.995
rpl30
Ribosomal_L7Ae domain-containing protein.
   
 0.994
rpl23
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
 0.994
rpl9
Uncharacterized protein.
  
 0.994
rplp0
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.994
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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