Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pnnPinin. (628 aa)    
Predicted Functional Partners:
rnps1
RRM domain-containing protein.
   
 0.999
Sap18
Histone deacetylase complex subunit SAP18-like protein.
    
 0.997
eif4a3
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 0.988
prpf4b
Protein kinase domain-containing protein.
   
 0.982
casc3
Btz domain-containing protein.
    
 0.945
pnisr
Uncharacterized protein.
   
 
 0.937
snip1
Smad nuclear interacting protein 1.
   
 
 0.930
ncbp3
Uncharacterized protein.
   
   0.925
luc7l3
Uncharacterized protein.
   
 
 0.920
ndufaf1
NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex, assembly factor 1.
    
   0.908
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.