STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103173613Uncharacterized protein. (165 aa)    
Predicted Functional Partners:
LOC103188431
Uncharacterized protein.
   
 0.795
ENSCMIP00000043260
Uncharacterized protein; Belongs to the cytochrome b5 family.
   
 0.795
suox
Cytochrome b5 heme-binding domain-containing protein.
   
  
 0.698
mtarc1
MOSC domain-containing protein.
   
 
 0.585
aldh18a1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
      
 0.553
mrps31
Uncharacterized protein.
      
 0.553
LOC103186924
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.549
LOC103175058
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
   
 0.534
LOC103188839
NAD_binding_1 domain-containing protein.
   
 0.534
ENSCMIP00000026785
Oxidoreductase-like domain-containing protein.
   
 0.534
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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