Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103172992Uncharacterized protein. (314 aa)    
Predicted Functional Partners:
LOC103172586
Uncharacterized protein.
 
    
0.907
LOC103191098
EGF-like domain-containing protein.
 
      0.899
ENSCMIP00000009972
Uncharacterized protein.
 
    
0.847
fbln1
Fibulin-1; Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes.
 
 
 
0.659
ENSCMIP00000008906
Uncharacterized protein.
 
    
0.640
lum
LRRNT domain-containing protein.
   
 0.532
pcsk4
P/Homo B domain-containing protein; Belongs to the peptidase S8 family.
   
 0.438
furin
P/Homo B domain-containing protein; Belongs to the peptidase S8 family.
   
 0.438
arid4b
ARID domain-containing protein.
    
 0.401
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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