STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000003355Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (91 aa)    
Predicted Functional Partners:
LOC103173315
Uncharacterized protein.
    
 
 0.802
arih1
RBR-type E3 ubiquitin transferase.
    
 0.678
Rnf217
RBR-type E3 ubiquitin transferase.
    
 0.572
tars1
AA_TRNA_LIGASE_II domain-containing protein.
   
 
 0.567
ENSCMIP00000010432
RRM domain-containing protein.
    
 
 0.563
LOC103184817
Uncharacterized protein.
   
 
 0.556
eif4enif1
Uncharacterized protein.
   
 
 0.556
ENSCMIP00000000904
CENP-F_N domain-containing protein.
    
 
 0.536
znf598
RING-type domain-containing protein.
    
 
 0.477
eif5b
Tr-type G domain-containing protein.
      
 0.471
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.