Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
kcnq2Uncharacterized protein; Belongs to the potassium channel family. (803 aa)    
Predicted Functional Partners:
fau
Ubiquitin-like domain-containing protein.
   
  0.778
pvalb
EF-hand domain-containing protein; Belongs to the parvalbumin family.
    
 0.603
slc26a5
STAS domain-containing protein.
      
 0.584
hvcn1
Uncharacterized protein.
      
 0.577
uba52
Ribosomal protein L40-like isoform 1.
   
 0.557
pjvk
Gasdermin domain-containing protein.
      
 0.551
LOC103174685
VWFA domain-containing protein.
    
 
 0.545
rpl13
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.544
rpl34
Uncharacterized protein.
  
 0.538
rpl21
60S ribosomal protein L21.
   
 0.535
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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