Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000003385Uncharacterized protein. (45 aa)    
Predicted Functional Partners:
kdelr2
ER lumen protein-retaining receptor.
   
 
 0.725
Rabac1
PRA1 family protein.
   
 
 0.708
maea
Uncharacterized protein.
   
 
 0.708
selenos
Uncharacterized protein.
   
 
 0.649
yipf5
Protein YIPF.
   
 
 0.649
yipf7
Protein YIPF5.
   
 
 0.649
yipf4
Protein YIPF.
   
 
 0.649
LOC103174330
GOLD domain-containing protein.
   
 
 0.514
tmed10
GOLD domain-containing protein; Belongs to the EMP24/GP25L family.
   
 
 0.514
ier3ip1
Immediate early response 3-interacting protein 1.
    
 
 0.450
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.