STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103191315Uncharacterized protein. (461 aa)    
Predicted Functional Partners:
ttc34
Uncharacterized protein.
   
  
 0.537
LOC103176282
DUF4709 domain-containing protein.
   
    0.535
cep72
Uncharacterized protein.
   
    0.535
oxsm
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.525
rbp2
FABP domain-containing protein; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
     
 0.478
mcat
PKS_AT domain-containing protein.
  
 
 0.473
fdx1
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.446
ENSCMIP00000034840
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.446
fdx2
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.446
h6pd
Uncharacterized protein.
  
 
 0.428
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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