STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gdap2Uncharacterized protein. (497 aa)    
Predicted Functional Partners:
wdr3
WD_REPEATS_REGION domain-containing protein.
      
 0.616
LOC103183694
Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes.
  
 
 
 0.608
LOC103181459
H2A histone family, member Y2; Belongs to the histone H2A family.
  
 
 
 0.591
ptgfrn
Uncharacterized protein.
      
 0.553
ENSCMIP00000022832
Macro domain-containing protein.
  
     0.526
ENSCMIP00000022806
Macro domain-containing protein.
  
     0.524
ENSCMIP00000022796
Macro domain-containing protein.
  
     0.522
Nhlh1
BHLH domain-containing protein.
      
 0.475
ENSCMIP00000003864
Uncharacterized protein.
      
 0.473
LOC103177453
Uncharacterized protein.
      
 0.459
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.