Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103173644Uncharacterized protein. (134 aa)    
Predicted Functional Partners:
slc39a8
Uncharacterized protein.
  
  
 
0.902
slc39a14
Uncharacterized protein.
 
      0.870
s100z
Protein S100; Belongs to the S-100 family.
      
 0.588
rnf128
E3 ubiquitin-protein ligase RNF128-like protein.
      
 0.587
slc30a10
Zinc transporter 10.
  
 0.550
Slc30a7
Uncharacterized protein.
  
 0.516
Slc30a1
Uncharacterized protein.
  
 0.510
slc30a4
Uncharacterized protein.
   
 0.503
kcnv2
Uncharacterized protein; Belongs to the potassium channel family.
      
 0.483
adcyap1
Growth hormone-releasing hormone/pituitary adenylate cyclase-activating polypeptide.
      
 0.468
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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