STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103174435TSP C-terminal domain-containing protein. (166 aa)    
Predicted Functional Partners:
ranbp2
Uncharacterized protein.
    
 0.602
osbpl8
Oxysterol-binding protein; Belongs to the OSBP family.
    
 0.497
itgb5
Integrin beta; Belongs to the integrin beta chain family.
    
 0.496
itgb3
Integrin beta; Belongs to the integrin beta chain family.
    
 0.496
ripk4
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.491
nek2
Serine/threonine-protein kinase Nek2.
    
 
 0.486
anapc1
APC1_C domain-containing protein.
      
 0.484
thbs2
Uncharacterized protein.
   
  0.457
thbs1
Thrombospondin 1.
   
  0.457
arid4b
ARID domain-containing protein.
    
 0.401
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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