Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tomm6Uncharacterized protein. (72 aa)    
Predicted Functional Partners:
tomm22
Mitochondrial import receptor subunit TOM22-like protein.
   
 0.997
tomm7
Putative mitochondrial import receptor subunit TOM7-like protein.
   
 0.997
tomm70
TPR_REGION domain-containing protein.
    
 0.991
ENSCMIP00000003208
Uncharacterized protein.
    
 0.982
LOC103178513
Mitochondrial import receptor subunit TOM20-like protein.
   
 0.894
tomm20
Uncharacterized protein.
   
 0.894
ENSCMIP00000042973
Uncharacterized protein.
   
 0.894
pink1
Protein kinase domain-containing protein.
    
 0.812
atp5mg
ATP synthase subunit; Mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F1 - containing the extramembraneous catalytic core, and F0 - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F1 is coupled via a rotary mechanism of the central stalk subunits to proto [...]
   
    0.788
ENSCMIP00000008840
Uncharacterized protein.
    
 0.745
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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