Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tspan31Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family. (207 aa)    
Predicted Functional Partners:
tspan32
Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.
      
 0.802
Kitlg
Uncharacterized protein.
      
 0.649
cct2
Uncharacterized protein.
      
 0.640
tti1
Uncharacterized protein.
      
 0.617
LOC103179852
SCP domain-containing protein; Belongs to the CRISP family.
      
 0.610
LOC103179853
SCP domain-containing protein; Belongs to the CRISP family.
      
 0.610
tspan7
Tetraspanin.
   
  
 0.609
tspan16
Tetraspanin.
      
 0.597
tspan1
Tetraspanin.
      
 0.597
dpagt1
UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase-like protein.
      
 0.588
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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