STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl18Uncharacterized protein. (120 aa)    
Predicted Functional Partners:
mrpl44
RNase III domain-containing protein.
   
 
 0.961
mrpl15
Ribosomal_L18e/L15P domain-containing protein.
   
 
 0.942
mrpl40
Mitochondrial ribosomal protein L40.
   
   0.941
mrpl4
Uncharacterized protein.
   
   0.936
mrps25
L51_S25_CI-B8 domain-containing protein.
   
 
 0.932
mrpl20
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.
   
   0.931
mrpl13
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
   
   0.929
mrpl55
Uncharacterized protein.
   
   0.929
mrpl32
Uncharacterized protein.
   
   0.928
Mrpl43
L51_S25_CI-B8 domain-containing protein.
   
   0.928
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.