Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
as3mtMethyltranfer_dom domain-containing protein. (338 aa)    
Predicted Functional Partners:
Ak9
Uncharacterized protein.
   
   0.774
ENSCMIP00000035595
Uncharacterized protein.
   
   0.774
n6amt1
MTS domain-containing protein.
      
 0.674
sigmar1
Uncharacterized protein.
   
 0.637
fdft1
Uncharacterized protein.
   
 0.614
sc5d
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 
 0.611
eif2s3
Tr-type G domain-containing protein.
   
 
 0.589
rictor
Uncharacterized protein.
    
 0.560
cdc27
Uncharacterized protein.
    
 
 0.549
mapkap1
Target of rapamycin complex 2 subunit MAPKAP1-like protein.
    
 0.544
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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