Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC103181342Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (321 aa)    
Predicted Functional Partners:
ENSCMIP00000005669
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
  
 
 0.630
ENSCMIP00000041582
Peptidase S1 domain-containing protein.
  
 
  0.608
ENSCMIP00000040673
Peptidase S1 domain-containing protein.
  
 
  0.549
ENSCMIP00000040756
Peptidase S1 domain-containing protein.
  
 
  0.529
ENSCMIP00000048356
Peptidase S1 domain-containing protein.
  
     0.516
cpa1
Peptidase_M14 domain-containing protein.
   
 
 0.511
LOC103177068
Uncharacterized protein.
   
 
 0.511
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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