Akirin-1 protein (Callorhinchus milii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

Akirin-1

Uncharacterized protein. (145 aa)

Predicted Functional Partners:

psma5

0.574

psma1

0.563

akirin2

0.558

psma2

0.529

LOC103171909

0.527

psma6

0.527

psmb2

0.525

psmb3

0.522

psma3

0.474

psmb4

0.474

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Akirin-1	LOC103171909	ENSCMIP00000003570	ENSCMIP00000002415	Uncharacterized protein.	Proteasome subunit alpha type.	0.527
Akirin-1	akirin2	ENSCMIP00000003570	ENSCMIP00000029660	Uncharacterized protein.	Uncharacterized protein.	0.558
Akirin-1	psma1	ENSCMIP00000003570	ENSCMIP00000034109	Uncharacterized protein.	Proteasome endopeptidase complex.	0.563
Akirin-1	psma2	ENSCMIP00000003570	ENSCMIP00000002462	Uncharacterized protein.	Proteasome endopeptidase complex.	0.529
Akirin-1	psma3	ENSCMIP00000003570	ENSCMIP00000001987	Uncharacterized protein.	Proteasome subunit alpha type.	0.474
Akirin-1	psma5	ENSCMIP00000003570	ENSCMIP00000004740	Uncharacterized protein.	Proteasome subunit alpha type.	0.574
Akirin-1	psma6	ENSCMIP00000003570	ENSCMIP00000003596	Uncharacterized protein.	Proteasome endopeptidase complex.	0.527
Akirin-1	psmb2	ENSCMIP00000003570	ENSCMIP00000012254	Uncharacterized protein.	Proteasome subunit beta.	0.525
Akirin-1	psmb3	ENSCMIP00000003570	ENSCMIP00000010819	Uncharacterized protein.	Proteasome subunit beta.	0.522
Akirin-1	psmb4	ENSCMIP00000003570	ENSCMIP00000005209	Uncharacterized protein.	Proteasome subunit beta.	0.474
LOC103171909	Akirin-1	ENSCMIP00000002415	ENSCMIP00000003570	Proteasome subunit alpha type.	Uncharacterized protein.	0.527
LOC103171909	akirin2	ENSCMIP00000002415	ENSCMIP00000029660	Proteasome subunit alpha type.	Uncharacterized protein.	0.843
LOC103171909	psma1	ENSCMIP00000002415	ENSCMIP00000034109	Proteasome subunit alpha type.	Proteasome endopeptidase complex.	0.999
LOC103171909	psma2	ENSCMIP00000002415	ENSCMIP00000002462	Proteasome subunit alpha type.	Proteasome endopeptidase complex.	0.999
LOC103171909	psma3	ENSCMIP00000002415	ENSCMIP00000001987	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
LOC103171909	psma5	ENSCMIP00000002415	ENSCMIP00000004740	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
LOC103171909	psma6	ENSCMIP00000002415	ENSCMIP00000003596	Proteasome subunit alpha type.	Proteasome endopeptidase complex.	0.999
LOC103171909	psmb2	ENSCMIP00000002415	ENSCMIP00000012254	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999
LOC103171909	psmb3	ENSCMIP00000002415	ENSCMIP00000010819	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999
LOC103171909	psmb4	ENSCMIP00000002415	ENSCMIP00000005209	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999