STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103180175BTB domain-containing protein. (659 aa)    
Predicted Functional Partners:
cul3
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.660
klhl21
BTB domain-containing protein.
  
 
0.509
bbs9
Uncharacterized protein.
    
 0.509
ENSCMIP00000037457
Uncharacterized protein.
  
 
 
0.478
ttc8
TPR_REGION domain-containing protein.
    
 0.469
ubxn7
UBX domain-containing protein 7.
    
 0.467
bbs7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
    
 0.459
mib2
Uncharacterized protein.
    
 0.457
dcun1d1
DCN1-like protein.
     
 0.457
kbtbd8
BTB domain-containing protein.
  
 
0.448
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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