STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000003575Uncharacterized protein. (70 aa)    
Predicted Functional Partners:
cdca8
Nbl1_Borealin_N domain-containing protein.
   
 0.992
incenp
Inner centromere protein.
   
 0.978
atp5f1b
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.921
ube2c
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.903
LOC103190377
Aurora kinase B; Belongs to the protein kinase superfamily.
   
 0.902
aurka
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.902
pbk
Lymphokine-activated killer T-cell-originated protein kinase-like protein.
   
 0.877
bub1
Uncharacterized protein.
   
 0.836
LOC103190678
Peptidase C50 domain-containing protein.
   
 
 0.816
cdc20
Cell division cycle 20-like protein.
   
 0.807
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.