STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000003619annotation not available (235 aa)    
Predicted Functional Partners:
ap2m1
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
  0.736
LOC103189527
AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]
    
  0.679
ap1b1
Uncharacterized protein.
    
  0.592
ap2b1
AP complex subunit beta.
    
  0.592
ap2s1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
  0.565
vamp4
V-SNARE coiled-coil homology domain-containing protein.
    
 0.491
gak
Uncharacterized protein.
    
 0.479
vamp3
V-SNARE coiled-coil homology domain-containing protein.
   
 0.474
rabepk
Rab9 effector protein with kelch motifs.
    
  0.464
LOC103172358
PB1 domain-containing protein.
   
 
 0.439
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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