wdpcp protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

wdpcp

Uncharacterized protein. (723 aa)

Predicted Functional Partners:

cplane2

0.981

cradd

0.962

tbc1d32

0.920

Fuz

0.847

fuz

0.847

intu

0.805

LOC103179443

0.748

ENSCMIP00000020540

0.712

mks1

0.692

bbs7

0.685

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000020540	bbs7	ENSCMIP00000020540	ENSCMIP00000019829	Uncharacterized protein.	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	0.989
ENSCMIP00000020540	mks1	ENSCMIP00000020540	ENSCMIP00000026659	Uncharacterized protein.	Meckel syndrome type 1 protein-like protein.	0.677
ENSCMIP00000020540	wdpcp	ENSCMIP00000020540	ENSCMIP00000003630	Uncharacterized protein.	Uncharacterized protein.	0.712
Fuz	cplane2	ENSCMIP00000024544	ENSCMIP00000016017	Uncharacterized protein.	Uncharacterized protein.	0.868
Fuz	intu	ENSCMIP00000024544	ENSCMIP00000039165	Uncharacterized protein.	PDZ domain-containing protein.	0.536
Fuz	wdpcp	ENSCMIP00000024544	ENSCMIP00000003630	Uncharacterized protein.	Uncharacterized protein.	0.847
LOC103179443	wdpcp	ENSCMIP00000038197	ENSCMIP00000003630	Uncharacterized protein.	Uncharacterized protein.	0.748
bbs7	ENSCMIP00000020540	ENSCMIP00000019829	ENSCMIP00000020540	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	Uncharacterized protein.	0.989
bbs7	mks1	ENSCMIP00000019829	ENSCMIP00000026659	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	Meckel syndrome type 1 protein-like protein.	0.637
bbs7	wdpcp	ENSCMIP00000019829	ENSCMIP00000003630	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	Uncharacterized protein.	0.685
cplane2	Fuz	ENSCMIP00000016017	ENSCMIP00000024544	Uncharacterized protein.	Uncharacterized protein.	0.868
cplane2	fuz	ENSCMIP00000016017	ENSCMIP00000024553	Uncharacterized protein.	Uncharacterized protein.	0.868
cplane2	intu	ENSCMIP00000016017	ENSCMIP00000039165	Uncharacterized protein.	PDZ domain-containing protein.	0.834
cplane2	tbc1d32	ENSCMIP00000016017	ENSCMIP00000012598	Uncharacterized protein.	Uncharacterized protein.	0.583
cplane2	wdpcp	ENSCMIP00000016017	ENSCMIP00000003630	Uncharacterized protein.	Uncharacterized protein.	0.981
cradd	wdpcp	ENSCMIP00000027651	ENSCMIP00000003630	Uncharacterized protein.	Uncharacterized protein.	0.962
fuz	cplane2	ENSCMIP00000024553	ENSCMIP00000016017	Uncharacterized protein.	Uncharacterized protein.	0.868
fuz	intu	ENSCMIP00000024553	ENSCMIP00000039165	Uncharacterized protein.	PDZ domain-containing protein.	0.536
fuz	wdpcp	ENSCMIP00000024553	ENSCMIP00000003630	Uncharacterized protein.	Uncharacterized protein.	0.847
intu	Fuz	ENSCMIP00000039165	ENSCMIP00000024544	PDZ domain-containing protein.	Uncharacterized protein.	0.536