STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000003640A to I editase domain-containing protein. (98 aa)    
Predicted Functional Partners:
dicer1
Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.
    
 0.686
dhx9
Uncharacterized protein.
   
 
 0.610
asns
Asparagine synthetase (Glutamine-hydrolyzing)-like protein.
   
  
 0.591
znfx1
Uncharacterized protein.
   
  
 0.571
ifih1
Uncharacterized protein.
   
  
 0.557
LOC103180762
A_deaminase domain-containing protein.
      
 0.513
ada
A_deaminase domain-containing protein.
      
 0.513
ENSCMIP00000001163
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.512
Eif2ak2
Uncharacterized protein.
   
 
 0.512
LOC103189845
Interferon-induced, double-stranded RNA-activated protein kinase-like protein; Belongs to the protein kinase superfamily.
   
 
 0.512
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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