STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eya1Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (594 aa)    
Predicted Functional Partners:
six1
Homeobox protein SIX1.
   
 
 0.845
ENSCMIP00000006111
Uncharacterized protein.
   
 
 0.572
six4
Homeobox domain-containing protein.
   
 
 0.572
LOC103172469
Homeobox domain-containing protein.
   
 
 0.572
pitx2
Homeobox protein.
    
 
 0.572
Myog
BHLH domain-containing protein.
   
  
 0.543
myf5
Myogenic factor.
   
  
 0.524
eya3
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
  
  
0.518
six6
Homeobox domain-containing protein.
   
 
 0.511
LOC103172488
SIX1_SD domain-containing protein.
   
 
 0.511
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.