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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
wars2Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (362 aa)    
Predicted Functional Partners:
yars1
Tyrosine--tRNA ligase.
  
  
 0.952
wars1
WHEP-TRS domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.949
eprs1
Uncharacterized protein.
  
  
 0.946
yars2
Tyrosine--tRNA ligase.
  
  
 0.843
rars2
DALR_1 domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.779
sars1
Seryl-tRNA synthetase, cytoplasmic-like protein.
  
 
 0.774
lars2
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.760
iars2
Isoleucine-tRNA ligase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.740
mars1
WHEP-TRS domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.731
lars1
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.729
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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