rhpn1 protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

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gene fusions

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[Homology]

Score

rhpn1

Uncharacterized protein. (639 aa)

Predicted Functional Partners:

ebag9

0.765

ptpn21

0.645

rhoc

0.602

ENSCMIP00000036907

0.602

rhoa

0.602

uevld

0.583

zc3h3

0.580

vps4a

0.560

vps4b

0.560

ENSCMIP00000003516

0.539

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000003516	ebag9	ENSCMIP00000003516	ENSCMIP00000023054	Uncharacterized protein.	Uncharacterized protein; May participate in suppression of cell proliferation and induces apoptotic cell death through activation of interleukin-1-beta converting enzyme (ICE)-like proteases.	0.623
ENSCMIP00000003516	rhpn1	ENSCMIP00000003516	ENSCMIP00000003689	Uncharacterized protein.	Uncharacterized protein.	0.539
ENSCMIP00000036907	rhpn1	ENSCMIP00000036907	ENSCMIP00000003689	Uncharacterized protein.	Uncharacterized protein.	0.602
ebag9	ENSCMIP00000003516	ENSCMIP00000023054	ENSCMIP00000003516	Uncharacterized protein; May participate in suppression of cell proliferation and induces apoptotic cell death through activation of interleukin-1-beta converting enzyme (ICE)-like proteases.	Uncharacterized protein.	0.623
ebag9	rhpn1	ENSCMIP00000023054	ENSCMIP00000003689	Uncharacterized protein; May participate in suppression of cell proliferation and induces apoptotic cell death through activation of interleukin-1-beta converting enzyme (ICE)-like proteases.	Uncharacterized protein.	0.765
ptpn21	rhpn1	ENSCMIP00000006302	ENSCMIP00000003689	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class subfamily.	Uncharacterized protein.	0.645
rhoa	rhoc	ENSCMIP00000043905	ENSCMIP00000031196	Uncharacterized protein.	Uncharacterized protein.	0.901
rhoa	rhpn1	ENSCMIP00000043905	ENSCMIP00000003689	Uncharacterized protein.	Uncharacterized protein.	0.602
rhoc	rhoa	ENSCMIP00000031196	ENSCMIP00000043905	Uncharacterized protein.	Uncharacterized protein.	0.901
rhoc	rhpn1	ENSCMIP00000031196	ENSCMIP00000003689	Uncharacterized protein.	Uncharacterized protein.	0.602
rhpn1	ENSCMIP00000003516	ENSCMIP00000003689	ENSCMIP00000003516	Uncharacterized protein.	Uncharacterized protein.	0.539
rhpn1	ENSCMIP00000036907	ENSCMIP00000003689	ENSCMIP00000036907	Uncharacterized protein.	Uncharacterized protein.	0.602
rhpn1	ebag9	ENSCMIP00000003689	ENSCMIP00000023054	Uncharacterized protein.	Uncharacterized protein; May participate in suppression of cell proliferation and induces apoptotic cell death through activation of interleukin-1-beta converting enzyme (ICE)-like proteases.	0.765
rhpn1	ptpn21	ENSCMIP00000003689	ENSCMIP00000006302	Uncharacterized protein.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class subfamily.	0.645
rhpn1	rhoa	ENSCMIP00000003689	ENSCMIP00000043905	Uncharacterized protein.	Uncharacterized protein.	0.602
rhpn1	rhoc	ENSCMIP00000003689	ENSCMIP00000031196	Uncharacterized protein.	Uncharacterized protein.	0.602
rhpn1	uevld	ENSCMIP00000003689	ENSCMIP00000025881	Uncharacterized protein.	UEV domain-containing protein.	0.583
rhpn1	vps4a	ENSCMIP00000003689	ENSCMIP00000001585	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.560
rhpn1	vps4b	ENSCMIP00000003689	ENSCMIP00000015157	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.560
rhpn1	zc3h3	ENSCMIP00000003689	ENSCMIP00000003652	Uncharacterized protein.	Uncharacterized protein.	0.580