Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tbx15Uncharacterized protein. (631 aa)    
Predicted Functional Partners:
tcf21
Transcription factor 21-like protein.
     
 0.621
shox2
Uncharacterized protein.
   
 0.597
wars2
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.589
wt1
Wilms tumor 1.
      
 0.554
wars1
WHEP-TRS domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.553
actr10
Uncharacterized protein; Belongs to the actin family.
      
 0.552
Nkx2-5
Homeobox domain-containing protein.
    
 0.550
LOC103175795
Homeobox domain-containing protein.
    
 0.422
isl2
Uncharacterized protein.
    
 0.415
isl1
Uncharacterized protein.
    
 0.415
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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