STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000003727Uncharacterized protein. (183 aa)    
Predicted Functional Partners:
msl3
MRG domain-containing protein.
    
 0.727
msl2
CXC domain-containing protein.
    
 0.670
ENSCMIP00000009972
Uncharacterized protein.
  
  0.583
ENSCMIP00000008021
Uncharacterized protein.
  
  0.580
LOC103172586
Uncharacterized protein.
  
  0.570
LOC103188191
Uncharacterized protein.
  
  0.527
ENSCMIP00000013783
MamL-1 domain-containing protein.
   
 0.516
ENSCMIP00000003804
EGF-like domain-containing protein.
  
  0.515
ENSCMIP00000003790
Uncharacterized protein.
  
     0.498
rbpj
Uncharacterized protein.
    
 0.493
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.