ENSCMIP00000003727 protein (Callorhinchus milii)

Nodes:

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

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Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSCMIP00000003727

Uncharacterized protein. (183 aa)

Predicted Functional Partners:

msl3

0.720

msl2

0.712

ENSCMIP00000009972

0.572

ENSCMIP00000008021

0.569

LOC103172586

0.559

ENSCMIP00000013783

0.553

rbpj

0.524

rbpjl

0.524

snw1

0.518

LOC103188191

0.515

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000003727	ENSCMIP00000008021	ENSCMIP00000003727	ENSCMIP00000008021	Uncharacterized protein.	Uncharacterized protein.	0.569
ENSCMIP00000003727	ENSCMIP00000009972	ENSCMIP00000003727	ENSCMIP00000009972	Uncharacterized protein.	Uncharacterized protein.	0.572
ENSCMIP00000003727	ENSCMIP00000013783	ENSCMIP00000003727	ENSCMIP00000013783	Uncharacterized protein.	MamL-1 domain-containing protein.	0.553
ENSCMIP00000003727	LOC103172586	ENSCMIP00000003727	ENSCMIP00000010204	Uncharacterized protein.	Uncharacterized protein.	0.559
ENSCMIP00000003727	LOC103188191	ENSCMIP00000003727	ENSCMIP00000010766	Uncharacterized protein.	Uncharacterized protein.	0.515
ENSCMIP00000003727	msl2	ENSCMIP00000003727	ENSCMIP00000035338	Uncharacterized protein.	CXC domain-containing protein.	0.712
ENSCMIP00000003727	msl3	ENSCMIP00000003727	ENSCMIP00000021671	Uncharacterized protein.	MRG domain-containing protein.	0.720
ENSCMIP00000003727	rbpj	ENSCMIP00000003727	ENSCMIP00000024936	Uncharacterized protein.	Uncharacterized protein.	0.524
ENSCMIP00000003727	rbpjl	ENSCMIP00000003727	ENSCMIP00000040615	Uncharacterized protein.	Uncharacterized protein.	0.524
ENSCMIP00000003727	snw1	ENSCMIP00000003727	ENSCMIP00000039498	Uncharacterized protein.	SKIP_SNW domain-containing protein.	0.518
ENSCMIP00000008021	ENSCMIP00000003727	ENSCMIP00000008021	ENSCMIP00000003727	Uncharacterized protein.	Uncharacterized protein.	0.569
ENSCMIP00000008021	LOC103172586	ENSCMIP00000008021	ENSCMIP00000010204	Uncharacterized protein.	Uncharacterized protein.	0.905
ENSCMIP00000008021	LOC103188191	ENSCMIP00000008021	ENSCMIP00000010766	Uncharacterized protein.	Uncharacterized protein.	0.907
ENSCMIP00000009972	ENSCMIP00000003727	ENSCMIP00000009972	ENSCMIP00000003727	Uncharacterized protein.	Uncharacterized protein.	0.572
ENSCMIP00000009972	LOC103172586	ENSCMIP00000009972	ENSCMIP00000010204	Uncharacterized protein.	Uncharacterized protein.	0.932
ENSCMIP00000009972	LOC103188191	ENSCMIP00000009972	ENSCMIP00000010766	Uncharacterized protein.	Uncharacterized protein.	0.911
ENSCMIP00000013783	ENSCMIP00000003727	ENSCMIP00000013783	ENSCMIP00000003727	MamL-1 domain-containing protein.	Uncharacterized protein.	0.553
ENSCMIP00000013783	rbpj	ENSCMIP00000013783	ENSCMIP00000024936	MamL-1 domain-containing protein.	Uncharacterized protein.	0.999
ENSCMIP00000013783	rbpjl	ENSCMIP00000013783	ENSCMIP00000040615	MamL-1 domain-containing protein.	Uncharacterized protein.	0.990
ENSCMIP00000013783	snw1	ENSCMIP00000013783	ENSCMIP00000039498	MamL-1 domain-containing protein.	SKIP_SNW domain-containing protein.	0.816