STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103173679Uncharacterized protein. (260 aa)    
Predicted Functional Partners:
ENSCMIP00000009896
Gelsolin-like domain-containing protein.
 
     0.940
LOC103189800
Gelsolin-like domain-containing protein.
 
     0.937
LOC103190306
HP domain-containing protein.
 
     0.931
scin
Uncharacterized protein.
  
  
 
0.908
LOC103174655
Uncharacterized protein.
  
  
 
0.908
pip5k1c
PIPK domain-containing protein.
     
  0.900
pip4k2a
PIPK domain-containing protein.
   
 
  0.900
pip4k2b
Phosphatidylinositol-5-phosphate 4-kinase type-2 beta-like protein.
   
 
  0.900
pip5k1b
PIPK domain-containing protein.
     
  0.900
pikfyve
Uncharacterized protein.
     
  0.900
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.