Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ralgapa1Rap-GAP domain-containing protein. (2609 aa)    
Predicted Functional Partners:
ralgapb
Rap-GAP domain-containing protein.
   
 0.932
LOC103191533
NF-kappa-B inhibitor-interacting Ras-like protein 2-like protein.
    
 
 0.773
fam91a1
Uncharacterized protein.
     
 0.614
gpn1
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
      
 0.576
acot8
Uncharacterized protein.
      
 0.556
Gfod1
Uncharacterized protein.
    
   0.508
gfod2
GFO_IDH_MocA domain-containing protein.
    
   0.508
crnkl1
Uncharacterized protein.
      
 0.484
ralb
Uncharacterized protein.
   
 0.482
rala
Uncharacterized protein.
   
 0.482
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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