Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ENSCMIP00000003828Aminotran_1_2 domain-containing protein. (221 aa)    
Predicted Functional Partners:
got2
Aspartate aminotransferase.
   
 
 0.961
got1
Aspartate aminotransferase.
   
 0.960
glud1
ELFV_dehydrog domain-containing protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.951
agxt
Serine--pyruvate aminotransferase.
  
 0.942
nags
N-acetylglutamate synthase, mitochondrial-like protein.
  
 
 0.929
gpt
Aminotran_1_2 domain-containing protein.
  
  
 
0.902
sdha
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
     
 0.902
gpt2
Aminotran_1_2 domain-containing protein.
  
  
 
0.902
LOC103174835
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 0.897
ldhb
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 0.897
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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