mydgf protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

mydgf

Uncharacterized protein. (165 aa)

Predicted Functional Partners:

txndc11

0.646

sacm1l

0.616

cope

0.600

xbp1

0.526

ENSCMIP00000005788

0.519

Prkcsh

0.519

Smim7

0.510

LOC103185656

0.497

mrpl4

0.470

ENSCMIP00000039518

0.464

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000005788	Prkcsh	ENSCMIP00000005788	ENSCMIP00000012604	PRKCSH_1 domain-containing protein.	EF-hand domain-containing protein.	0.540
ENSCMIP00000005788	mydgf	ENSCMIP00000005788	ENSCMIP00000003834	PRKCSH_1 domain-containing protein.	Uncharacterized protein.	0.519
ENSCMIP00000039518	mrpl4	ENSCMIP00000039518	ENSCMIP00000047937	GATA-type domain-containing protein.	Uncharacterized protein.	0.464
ENSCMIP00000039518	mydgf	ENSCMIP00000039518	ENSCMIP00000003834	GATA-type domain-containing protein.	Uncharacterized protein.	0.464
LOC103185656	mydgf	ENSCMIP00000033657	ENSCMIP00000003834	Uncharacterized protein; Belongs to the protein disulfide isomerase family.	Uncharacterized protein.	0.497
LOC103185656	xbp1	ENSCMIP00000033657	ENSCMIP00000017135	Uncharacterized protein; Belongs to the protein disulfide isomerase family.	BZIP domain-containing protein.	0.747
Prkcsh	ENSCMIP00000005788	ENSCMIP00000012604	ENSCMIP00000005788	EF-hand domain-containing protein.	PRKCSH_1 domain-containing protein.	0.540
Prkcsh	mydgf	ENSCMIP00000012604	ENSCMIP00000003834	EF-hand domain-containing protein.	Uncharacterized protein.	0.519
Smim7	cope	ENSCMIP00000043995	ENSCMIP00000008509	Uncharacterized protein.	Uncharacterized protein.	0.447
Smim7	mydgf	ENSCMIP00000043995	ENSCMIP00000003834	Uncharacterized protein.	Uncharacterized protein.	0.510
cope	Smim7	ENSCMIP00000008509	ENSCMIP00000043995	Uncharacterized protein.	Uncharacterized protein.	0.447
cope	mrpl4	ENSCMIP00000008509	ENSCMIP00000047937	Uncharacterized protein.	Uncharacterized protein.	0.480
cope	mydgf	ENSCMIP00000008509	ENSCMIP00000003834	Uncharacterized protein.	Uncharacterized protein.	0.600
mrpl4	ENSCMIP00000039518	ENSCMIP00000047937	ENSCMIP00000039518	Uncharacterized protein.	GATA-type domain-containing protein.	0.464
mrpl4	cope	ENSCMIP00000047937	ENSCMIP00000008509	Uncharacterized protein.	Uncharacterized protein.	0.480
mrpl4	mydgf	ENSCMIP00000047937	ENSCMIP00000003834	Uncharacterized protein.	Uncharacterized protein.	0.470
mrpl4	sacm1l	ENSCMIP00000047937	ENSCMIP00000024681	Uncharacterized protein.	SAC domain-containing protein.	0.478
mydgf	ENSCMIP00000005788	ENSCMIP00000003834	ENSCMIP00000005788	Uncharacterized protein.	PRKCSH_1 domain-containing protein.	0.519
mydgf	ENSCMIP00000039518	ENSCMIP00000003834	ENSCMIP00000039518	Uncharacterized protein.	GATA-type domain-containing protein.	0.464
mydgf	LOC103185656	ENSCMIP00000003834	ENSCMIP00000033657	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein disulfide isomerase family.	0.497